Table 3 Genome statistics
Attribute | Value | % of Totala |
|---|---|---|
Genome size (bp) | 121,442 | 100.00 |
DNA coding (bp) | 114,642 | 94.40 |
DNA G + C (bp) | 45,419 | 37.40 |
DNA scaffolds | 1 | 100.00 |
Total genes | 196 | 100.00 |
Protein coding genes | 194 | 98.98 |
RNA genes | 2 | 1.02 |
Pseudo genes | 0 | 0.00 |
Genes in internal clusters | 0 | 0.00 |
Genes with function prediction | 95 | 48.47 |
Genes assigned to COGs | 148 | 75.51 |
Genes with Pfam domains | 62 | 31.96 |
Genes with signal peptides | 5 | 2.57 |
Genes with transmembrane helices | 15 | 7.73 |
CRISPR repeats | 0 | 0.00 |