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Table 4 Number of genes associated with general COG functional categories

From: Genome sequence and overview of Oligoflexus tunisiensis Shr3T in the eighth class Oligoflexia of the phylum Proteobacteria

Code

Value

%age

Description

J

228

6.91

Translation, ribosomal structure and biogenesis

A

1

0.03

RNA processing and modification

K

154

4.67

Transcription

L

103

3.12

Replication, recombination and repair

B

1

0.03

Chromatin structure and dynamics

D

31

0.94

Cell cycle control, Cell division, chromosome partitioning

V

87

2.64

Defense mechanisms

T

314

9.52

Signal transduction mechanisms

M

229

6.94

Cell wall/membrane biogenesis

N

125

3.79

Cell motility

U

44

1.33

Intracellular trafficking and secretion

O

159

4.82

Posttranslational modification, protein turnover, chaperones

C

172

5.21

Energy production and conversion

G

142

4.30

Carbohydrate transport and metabolism

E

264

8.00

Amino acid transport and metabolism

F

73

2.21

Nucleotide transport and metabolism

H

170

5.15

Coenzyme transport and metabolism

I

193

5.85

Lipid transport and metabolism

P

156

4.73

Inorganic ion transport and metabolism

Q

100

3.03

Secondary metabolites biosynthesis, transport and catabolism

R

337

10.22

General function prediction only

S

153

4.64

Function unknown

-

3,525

54.54

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome