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Table 4 Number of genes associated with general COG functional categories

From: Complete genome anatomy of the emerging potato pathogen Dickeya solani type strain IPO 2222T

Code Value % agea Description
J 234 6.09 Translation, ribosomal structure and biogenesis
A 1 0.03 RNA processing and modification
K 305 7.94 Transcription
L 112 2.92 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 42 1.09 Cell cycle control, Cell division, chromosome partitioning
V 90 2.34 Defense mechanisms
T 216 5.62 Signal transduction mechanisms
M 245 6.38 Cell wall/membrane biogenesis
N 106 2.76 Cell motility
U 82 2.14 Intracellular trafficking and secretion
O 138 3.59 Posttranslational modification, protein turnover, chaperones
C 222 5.78 Energy production and conversion
G 324 8.44 Carbohydrate transport and metabolism
E 438 11.41 Amino acid transport and metabolism
F 96 2.5 Nucleotide transport and metabolism
H 192 5.0 Coenzyme transport and metabolism
I 130 3.39 Lipid transport and metabolism
P 281 7.32 Inorganic ion transport and metabolism
Q 93 2.42 Secondary metabolites biosynthesis, transport and catabolism
R 282 7.34 General function prediction only
S 175 4.56 Function unknown
- 843 20.03 Not in COGs
bTotal 4,683 120  
  1. aThe percentage is based on the total number of protein coding genes in the annotated genome
  2. bThe total does not correspond to 4,208 CDS because some genes are associated with more than one COG functional categories