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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of Streptomyces sp. TP-A0867, an alchivemycin producer

Code

Value

% age

Description

J

289

3.4

Translation, ribosomal structure and biogenesis

A

4

0.04

RNA processing and modification

K

1,036

12.3

Transcription

L

345

4.1

Replication, recombination and repair

B

3

0.03

Chromatin structure and dynamics

D

52

0.6

Cell cycle control, Cell division, chromosome partitioning

V

133

1.58

Defense mechanisms

T

506

6.03

Signal transduction mechanisms

M

337

4.02

Cell wall/membrane biogenesis

N

43

0.51

Cell motility

U

85

1.01

Intracellular trafficking and secretion

O

211

2.52

Posttranslational modification, protein turnover, chaperones

C

543

6.48

Energy production and conversion

G

751

8.96

Carbohydrate transport and metabolism

E

811

9.67

Amino acid transport and metabolism

F

134

1.60

Nucleotide transport and metabolism

H

286

3.41

Coenzyme transport and metabolism

I

431

5.14

Lipid transport and metabolism

P

462

5.51

Inorganic ion transport and metabolism

Q

529

6.31

Secondary metabolites biosynthesis, transport and catabolism

R

1,383

16.5

General function prediction only

S

471

5.62

Function unknown

-

1,153

13.8

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome