Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,795,311 | 100.0 |
DNA coding (bp) | 6,219,133 | 91.5 |
DNA G + C (bp) | 4,955,456 | 72.9 |
DNA scaffolds | 24 | - |
Total genes | 6,273 | 100.0 |
Protein coding genes | 6,219 | 99.1 |
RNA genes | 54 | 0.9 |
Pseudogenes | - | - |
Genes in internal clusters | 2,376 | 37.8 |
Genes with function prediction | 3,909 | 62.3 |
Genes assigned to COGs | 4,846 | 77.2 |
Genes with Pfam domains | 5,528 | 84.1 |
Genes with signal peptides | 480 | 7.7 |
Genes with transmembrane helices | 1,546 | 24.6 |
CRISPR repeats | 0 | - |