Table 3 Genome statistics
From: Draft genome sequence of Streptomyces sp. MWW064 for elucidating the rakicidin biosynthetic pathway
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 7,904,619 | 100.0 |
DNA coding (bp) | 6,855,885 | 86.7 |
DNA G + C (bp) | 5,597,799 | 70.8 |
DNA scaffolds | 99 | - |
Total genes | 7,206 | - |
Protein coding genes | 7,135 | 99.0 |
RNA genes | 71 | 0.99 |
Pseudogenes | - | - |
Genes in internal clusters | 2,610 | 36.2 |
Genes with function prediction | 4,515 | 62.7 |
Genes assigned to COGs | 6,044 | 83.9 |
Genes with Pfam domains | 4,870 | 67.6 |
Genes with signal peptides | 559 | 7.8 |
Genes with transmembrane helices | 1,550 | 21.5 |
CRISPR repeats | 1 | - |