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Table 3 Genome statistics

From: Draft genome of Prochlorothrix hollandica CCAP 1490/1T (CALU1027), the chlorophyll a/b-containing filamentous cyanobacterium

Attribute Genome (total)
Value % of totala
Genome size (bp) 5,525,469 100.00
DNA coding (bp) 3,931,877 71.16
DNA Gā€‰+ā€‰C (bp) 2,999,78 54.56
DNA scaffolds 10 āˆ’
Total genes 4,294 100.00
Protein coding genes 3,737 87.00
RNA genes 57 1.32
rRNA genes 12 0.28
tRNA genes 44 1.02
ncRNA genes 1 0.02
Pseudo genes 515 11.99
Genes in internal clusters 235 5.4
Genes with function prediction 2,770 64,5
Genes assigned to COGs 2,855 66.00
Genes with Pfam domains 2,386 55.56
Genes with signal peptides 86 2
Genes with transmembrane helices 869 20.24
CRISPR repeats 9 0.2
  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome