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Table 3 Genome statistics

From: Draft genome of Prochlorothrix hollandica CCAP 1490/1T (CALU1027), the chlorophyll a/b-containing filamentous cyanobacterium

Attribute

Genome (total)

Value

% of totala

Genome size (bp)

5,525,469

100.00

DNA coding (bp)

3,931,877

71.16

DNA G + C (bp)

2,999,78

54.56

DNA scaffolds

10

Total genes

4,294

100.00

Protein coding genes

3,737

87.00

RNA genes

57

1.32

rRNA genes

12

0.28

tRNA genes

44

1.02

ncRNA genes

1

0.02

Pseudo genes

515

11.99

Genes in internal clusters

235

5.4

Genes with function prediction

2,770

64,5

Genes assigned to COGs

2,855

66.00

Genes with Pfam domains

2,386

55.56

Genes with signal peptides

86

2

Genes with transmembrane helices

869

20.24

CRISPR repeats

9

0.2

  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome