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Table 2 Classification and general features of P.jessenii H16 according to the MIGS recommendations [15]

From: Two draft genome sequences of Pseudomonas jessenii strains isolated from a copper contaminated site in Denmark

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [40]

Phylum Proteobacteria

TAS [41]

Class Gammaproteobacteria

TAS [42, 43]

Order Pseudomonadales

TAS [44]

Family Pseudomonadaceae

TAS [45]

Genus Pseudomonas

TAS [46, 47]

Species P. jessenii

TAS [48]

strain: H16

IDA

Gram stain

Negative

IDA

Cell shape

Rod-shaped

IDA

Motility

Motile

IDA

Sporulation

Non-sporulating

IDA

Temperature range

4–37 °C

IDA

Optimum temperature

30 °C

IDA

Optimum pH

6.7

IDA

Carbon source

d-glucose, d-melibiose, d-sucrose, d-mannitol, trehalose, d-lyxose, L-arabinose,inostitol

IDA

MIGS-6

Habitat

Copper contaminated soil

IDA

MIGS-6.3

Salinity

0–4 %

IDA

MIGS-22

Oxygen requirement

Aerobic

IDA

MIGS-15

Biotic relationship

Free-living

IDA

MIGS-14

Pathogenicity

Non-pathogen

NAS

MIGS-4

Geographic location

Hygum, Denmark

IDA

MIGS-5

Sample collection

May 2013

IDA

MIGS-4.1

Latitude

55° 46’ 25’’N

IDA

MIGS-4.2

Longitude

9° 25’ 52’’ E

IDA

  1. aEvidence codes - IDA inferred from direct assay, TAS traceable author statement (i.e., a direct report exists in the literature), NAS non-traceable author statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [49]. If the evidence is IDA, the property was directly observed by the authors