Table 4 Number of genes associated with the general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 180 | 5.13 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.05 | RNA processing and modification |
K | 119 | 3.39 | Transcription |
L | 146 | 4.16 | Replication, recombination and repair |
B | 5 | 0.14 | Chromatin structure and dynamics |
D | 32 | 0.91 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear structure |
V | 51 | 1.45 | Defence mechanisms |
T | 82 | 2.33 | Signal transduction mechanisms |
M | 114 | 3.25 | Cell wall/membrane/envelope biogenesis |
N | 30 | 0.85 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 29 | 0.82 | Intracellular trafficking, secretion and vesicular transport |
O | 120 | 3.42 | Posttranslational modification, protein turnover, chaperones |
C | 224 | 6.38 | Energy production and conversion |
G | 128 | 3.64 | Carbohydrate transport and metabolism |
E | 208 | 5.93 | Amino acid transport and metabolism |
F | 70 | 1.99 | Nucleotide transport and metabolism |
H | 160 | 4.56 | Coenzyme transport and metabolism |
I | 42 | 1.19 | Lipid transport and metabolism |
P | 174 | 4.96 | Inorganic ion transport and metabolism |
Q | 34 | 0.96 | Secondary metabolites biosynthesis, transport and catabolism |
R | 429 | 12.23 | General function prediction only |
S | 333 | 9.49 | Function unknown |
1184 | 34.00 | Not in COGs |