Table 3 Genomic statistics
Attribute | Value | % of total |
|---|---|---|
Genome size (bp) | 2,859,299 | 100.00 |
DNA Coding (bp) | 2,430,404 | 85.00 |
DNA G + C (bp) | 1,723,014 | 60.26 |
DNA scaffolds | 1 | - |
Total genes | 3507 | 100.00 |
Protein coding genes | 3450 | 98.37 |
RNA genes | 44 | 1.25 |
Pseudo gene | 57 | 1.62 |
Genes in internal clusters | 1580 | 45.00 |
Genes with function prediction | 1472 | 43.00 |
Genes assigned to COGs | 2323 | 66.24 |
Genes with Pfam domains | 2801 | 79.84 |
Genes with signal peptides | 332 | 9.46 |
Genes with transmembrane helices | 650 | 18.53 |
CRISPR repeats | 3 | .08 |