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Table 4 Number of genes associated with general COG functional categories

From: A draft genome sequence of Pseudomonas veronii R4: a grapevine (Vitis vinifera L.) root-associated strain with high biocontrol potential

Code Value % age Description
J 190 3.22 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 523 8.86 Transcription
L 155 2.62 Replication, recombination and repair
B 3 0.05 Chromatin structure and dynamics
D 45 0.76 Cell cycle control, Cell division, chromosome partitioning
V 81 1.37 Defense mechanisms
T 445 7.53 Signal transduction mechanisms
M 271 4.59 Cell wall/membrane biogenesis
N 211 3.57 Cell motility
U 157 2.66 Intracellular trafficking and secretion
O 190 3.22 Posttranslational modification, protein turnover, chaperones
C 340 5.76 Energy production and conversion
G 303 5.13 Carbohydrate transport and metabolism
E 569 9.63 Amino acid transport and metabolism
F 109 1.85 Nucleotide transport and metabolism
H 212 3.59 Coenzyme transport and metabolism
I 235 3.98 Lipid transport and metabolism
P 308 5.22 Inorganic ion transport and metabolism
Q 156 2.64 Secondary metabolites biosynthesis, transport and catabolism
R 611 10.35 General function prediction only
S 470 7.96 Function unknown
983 16.64 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome