Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,649,820 | 100.0 |
DNA coding (bp) | 5,735,337 | 86.2 |
DNA G + C (bp) | 4,043,431 | 60.8 |
DNA scaffolds | 2 | – |
Total genes | 5,967 | 100.0 |
Protein coding genes | 5,906 | 99.0 |
RNA genes | 61 | 1.0 |
Pseudo genes | – | – |
Genes in internal clusters | – | – |
Genes with function prediction | 4,894 | 82.9 |
Genes assigned to COGs | 4,923 | 83.4 |
Genes with Pfam domains | 4,799 | 80.4 |
Genes with signal peptides | 557 | 9.4 |
Genes with transmembrane helices | 1,322 | 22.4 |
CRISPR repeats | 0 | 0 |