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Table 4 Number of genes associated with general COG functional categories

From: The complete genome sequences of sulfur-oxidizing Gammaproteobacteria Sulfurifustis variabilis skN76T and Sulfuricaulis limicola HA5T

Code

Sulfurifustis variabilis skN76T

Sulfuricaulis limicola HA5T

Description

Value

%age

Value

%age

J

164

4.24

159

5.75

Translation, ribosomal structure and biogenesis

A

5

0.13

2

0.07

RNA processing and modification

K

191

4.94

130

4.71

Transcription

L

154

3.99

117

4.23

Replication, recombination and repair

B

1

0.03

1

0.04

Chromatin structure and dynamics

D

36

0.93

31

1.12

Cell cycle control, Cell division, chromosome partitioning

V

43

1.11

29

1.05

Defense mechanisms

T

283

7.32

218

7.89

Signal transduction mechanisms

M

265

6.86

210

7.60

Cell wall/membrane biogenesis

N

66

1.71

64

2.32

Cell motility

U

123

3.18

98

3.55

Intracellular trafficking and secretion

O

185

4.79

142

5.14

Posttranslational modification, protein turnover, chaperones

C

265

6.86

192

6.95

Energy production and conversion

G

148

3.83

101

3.66

Carbohydrate transport and metabolism

E

201

5.20

150

5.43

Amino acid transport and metabolism

F

63

1.63

59

2.14

Nucleotide transport and metabolism

H

167

4.32

129

4.67

Coenzyme transport and metabolism

I

90

2.33

65

2.35

Lipid transport and metabolism

P

189

4.89

127

4.60

Inorganic ion transport and metabolism

Q

56

1.45

35

1.27

Secondary metabolites biosynthesis, transport and catabolism

R

394

10.20

247

8.94

General function prediction only

S

346

8.95

230

8.32

Function unknown

-

943

24.40

598

21.64

Not in COGs