The complete genome sequences of sulfur-oxidizing Gammaproteobacteria Sulfurifustis variabilis skN76T and Sulfuricaulis limicola HA5T

Umezawa, Kazuhiro; Watanabe, Tomohiro; Miura, Aya; Kojima, Hisaya; Fukui, Manabu

doi:10.1186/s40793-016-0196-0

Environmental Microbiome

Table 1 Classification and general features of Sulfurifustis variabilis skN76^T and Sulfuricaulis limicola HA5^T according to MIGS recommendations

From: The complete genome sequences of sulfur-oxidizing Gammaproteobacteria Sulfurifustis variabilis skN76^T and Sulfuricaulis limicola HA5^T

MIGS ID	Property	Sulfurifustis variabilis skN76^T		Sulfuricaulis limicola HA5^T
MIGS ID	Property	Term	Evidence code ^a	Term	Evidence code ^a
	Classification	Domain Bacteria	TAS [23]	Domain Bacteria	TAS [23]
		Phylum Proteobacteria	TAS [24]	Phylum Proteobacteria	TAS [24]
		Class Gammaproteobacteria	TAS [25]	Class Gammaproteobacteria	TAS [25]
		Order Acidiferrobacterales	TAS [1]	Order Acidiferrobacterales	TAS [1]
		Family Acidiferrobacteraceae	TAS [1]	Family Acidiferrobacteraceae	TAS [1]
		Genus Sulfurifustis	TAS [1]	Genus Sulfuricaulis	TAS [2]
		Species Sulfurifustis variabilis	TAS [1]	Species Sulfuricaulis limicola	TAS [2]
		Type strain skN76		Type strain HA5
	Gram stain	negative	TAS [1]	negative	TAS [2]
	Cell shape	rod or filaments	TAS [1]	rod	TAS [2]
	Motility	motile	TAS [1]	not reported
	Sporulation	not reported		not reported
	Temperature range	28–46 °C	TAS [1]	8–37 °C	TAS [2]
	Optimum temperature	42–45 °C	TAS [1]	28–32 °C	TAS [2]
	pH range; Optimum	6.3–8.9; 6.8–8.2	TAS [1]	6.1–9.2; unknown	TAS [2]
	Carbon source	bicarbonate	TAS [1]	bicarbonate	TAS [2]
MIGS-6	Habitat	Sediment of a lake	TAS [1]	Sediment of a lake	TAS [2]
MIGS-6.3	Salinity	<2.6 % NaCl (w/v)	TAS [1]	<1.2 % NaCl (w/v)	TAS [2]
MIGS-22	Oxygen requirement	aerobic	TAS [1]	aerobic	TAS [2]
MIGS-15	Biotic relationship	free-living	TAS [1]	free-living	TAS [2]
MIGS-14	Pathogenicity	non-pathogen	NAS	non-pathogen	NAS
MIGS-4	Geographic location	Lake Mizugaki, Japan	TAS [1]	Lake Harutori, Japan	TAS [2]
MIGS-5	Sample collection	November 30, 2010	NAS	April 26, 2012	NAS
MIGS-4.1	Latitude	35°51.5′ N	TAS [26]	42°58.4′ N	NAS
MIGS-4.2	Longitude	138°30.0′ E	TAS [26]	144°23.9′ E	NAS
MIGS-4.4	Altitude	not reported		not reported

^a Evidence codes–IDA Inferred from Direct Assay, TAS Traceable Author Statement (i.e., a direct report exists in the literature), NAS Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project

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