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Table 1 Classification and general features of Halomonas sp. R5-57 [18]

From: Complete genome sequence of Halomonas sp. R5-57

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain: Bacteria

TAS [31]

  

Phylum: Proteobacteria

TAS [32]

  

Class: Gammaproteobacteria

TAS [33]

  

Order: Oceanospirillales

TAS [3436]

  

Family: Halomonadaceae

TAS [33, 3739]

  

Genus: Halomonas

TAS [2, 40, 41]

  

Species: Halomonas sp.

TAS [2, 40, 41]

  

Strain: R5-57

 
 

Gram stain

Negative

TAS [42]

 

Cell shape

Rods

IDA

 

Motility

Motile

TAS [43]

 

Sporulation

Not reported

NAS

 

Temperature range

4 – 41 °C

IDA

 

Optimum temperature

20 °C

IDA

 

pH range; Optimum

8.0-10.0

TAS [43]

 

Carbon source

Glucose, mannitol, inositol sorbitol, sucrose, melibiose, amygdaline, arabinose, manose, mannitol, N-acetyl glucosamine, maltose, potassium gluconate, capric acid, adipic acid malate

IDA

MIGS-6

Habitat

Marine Arctic

IDA

MIGS-6.3

Salinity

Requires >1 % NaCl, tolerates up to 12 % NaCl. Optimum is 3.5-7.0 % NaCl

IDA

MIGS-22

Oxygen requirement

Aerobic

TAS [43]

MIGS-15

Biotic relationship

Free living, isolated from the skin of the red sea squirt Halocynthia papillosa

NAS/IDA

MIGS-14

Pathogenicity

Not reported

NAS

MIGS-4

Geographic location

Sagaskjær

IDA

MIGS-5

Sample collection

14.05.2009

IDA

MIGS-4.1

Latitude

78.12.78372 N,

IDA

MIGS-4.2

Longitude

013.58.27000 E

IDA

MIGS-4.4

Altitude

−180.42 m

IDA

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [44]