Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 205 | 6.48 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.03 | RNA processing and modification |
K | 180 | 5.69 | Transcription |
L | 117 | 3.70 | Replication, recombination and repair |
B | 2 | 0.06 | Chromatin structure and dynamics |
D | 41 | 1.30 | Cell cycle control, Cell division, chromosome partitioning |
V | 66 | 2.09 | Defense mechanisms |
T | 244 | 7.71 | Signal transduction mechanisms |
M | 160 | 5.06 | Cell wall/membrane biogenesis |
N | 120 | 3.79 | Cell motility |
U | 49 | 1.55 | Intracellular trafficking and secretion |
O | 207 | 6.54 | Posttranslational modification, protein turnover, chaperones |
C | 339 | 10.71 | Energy production and conversion |
G | 116 | 3.67 | Carbohydrate transport and metabolism |
E | 244 | 7.71 | Amino acid transport and metabolism |
F | 57 | 1.80 | Nucleotide transport and metabolism |
H | 166 | 5.24 | Coenzyme transport and metabolism |
I | 148 | 4.68 | Lipid transport and metabolism |
P | 187 | 5.91 | Inorganic ion transport and metabolism |
Q | 76 | 2.40 | Secondary metabolites biosynthesis, transport and catabolism |
R | 211 | 6.67 | General function prediction only |
S | 175 | 5.53 | Function unknown |
- | 1499 | 34.61 | Not in COGs |