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Table 1 Classification and general features of Sedimenticola selenatireducens strain AK4OH1T according to the MIGS recommendations [18]

From: High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1T, a gammaproteobacterium isolated from estuarine sediment

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [31]

  

Phylum Proteobacteria

TAS [32]

  

Class Gammaproteobacteria

TAS [33, 34]

  

Genus Sedimenticola

TAS [10, 35]

  

Species Sedimenticola selenatireducens

TAS [10, 35]

  

Type strain: AK4OH1T

 
 

Gram stain

negative

TAS [10]

 

Cell shape

rod (1.5 μm long, 0.5 μm wide)

TAS [10]

 

Motility

motile at some growth stages

TAS [12]

 

Sporulation

none

TAS [10]

 

Temperature range

mesophile

TAS [10]

 

Optimum temperature

28 °C

TAS [10]

 

pH range; Optimum

7

TAS [10]

 

Carbon source

benzoate, 3-hydroxybenzoate, 4-hydroxybenzoate, acetate, formate, pyruvate, methyl-pyruvate, L-lactate, D- and L-malate, propionate, fumarate, succinate, methyl-succinate, bromo-succinate, p-hydroxyphenylacetic acid, cysteine

TAS [10, 12]

MIGS-6

Habitat

estuarine sediment

TAS [10]

MIGS-6.3

Salinity

1.1-2.3 % NaCl (w/v)

TAS [10]

MIGS-22

Oxygen requirement

anaerobe-microaerophile

TAS [10, 12]

MIGS-15

Biotic relationship

free-living

TAS [10]

MIGS-14

Pathogenicity

unknown

NAS

MIGS-4

Geographic location

Hudson River estuary, Arthur Kill, intertidal strait NY/NJ, USA

TAS [10]

MIGS-5

Sample collection

1995

TAS [10]

MIGS-4.1

Latitude

40°586′N

TAS [10]

MIGS-4.2

Longitude

74°207′E

TAS [10]

MIGS-4.3

Depth

surface sediment

TAS [10]

MIGS-4.4

Altitude

sea level

TAS [10]

  1. a Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [36]