Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 6,951,444 | 100.00 |
DNA coding (bp) | 6,028,113 | 86.72 |
DNA G + C (bp) | 4,665,300 | 67.11 |
DNA scaffolds | 1 | 100.00 |
Total genes | 6169 | 100.00 |
Protein coding genes | 6071 | 98.41 |
RNA genes | 96 | 1.56 |
Pseudo genes | 2 | 0.03 |
Genes in internal clusters | NA | NA |
Genes with function prediction | 4762 | 77.19 |
Genes assigned to COGs | 5523 | 89.53 |
Genes with Pfam domains | 5242 | 84.97 |
Genes with signal peptides | 702 | 11.38 |
Genes with transmembrane helices | 1263 | 20.47 |
CRISPR repeats | 1 |