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Table 4 Number of genes associated with general COG functional categories

From: Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57

Code Value %agea Description
J 136 3.48 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 89 2.23 Transcription
L 95 2.43 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 22 0.56 Cell cycle control, Cell division, chromosome partitioning
V 17 0.44 Defence mechanisms
T 58 1.48 Signal transduction mechanisms
M 97 2.48 Cell wall/membrane biogenesis
N 40 1.02 Cell motility
U 37 0.95 Intracellular trafficking and secretion
O 64 1.64 Posttranslational modification, protein turnover, chaperones
C 92 2.35 Energy production and conversion
G 109 2.79 Carbohydrate transport and metabolism
E 160 4.09 Amino acid transport and metabolism
F 62 1.59 Nucleotide transport and metabolism
H 93 2.38 Coenzyme transport and metabolism
I 53 1.36 Lipid transport and metabolism
P 93 2.38 Inorganic ion transport and metabolism
Q 30 0.77 Secondary metabolites biosynthesis, transport and catabolism
R 203 5.19 General function prediction only
S 238 6.09 Function unknown
- 2169 55.49 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the genome