Table 4 Number of genes associated with general COG functional categories
From: Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
Code | Value | %agea | Description |
|---|---|---|---|
J | 136 | 3.48 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 89 | 2.23 | Transcription |
L | 95 | 2.43 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 22 | 0.56 | Cell cycle control, Cell division, chromosome partitioning |
V | 17 | 0.44 | Defence mechanisms |
T | 58 | 1.48 | Signal transduction mechanisms |
M | 97 | 2.48 | Cell wall/membrane biogenesis |
N | 40 | 1.02 | Cell motility |
U | 37 | 0.95 | Intracellular trafficking and secretion |
O | 64 | 1.64 | Posttranslational modification, protein turnover, chaperones |
C | 92 | 2.35 | Energy production and conversion |
G | 109 | 2.79 | Carbohydrate transport and metabolism |
E | 160 | 4.09 | Amino acid transport and metabolism |
F | 62 | 1.59 | Nucleotide transport and metabolism |
H | 93 | 2.38 | Coenzyme transport and metabolism |
I | 53 | 1.36 | Lipid transport and metabolism |
P | 93 | 2.38 | Inorganic ion transport and metabolism |
Q | 30 | 0.77 | Secondary metabolites biosynthesis, transport and catabolism |
R | 203 | 5.19 | General function prediction only |
S | 238 | 6.09 | Function unknown |
- | 2169 | 55.49 | Not in COGs |