Table 3 Genome statistics
From: Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,958,833 | 100.00 |
DNA coding (bp) | 3,549,557 | 89.66 |
DNA G + C (bp) | 1,837,549 | 46.42 |
DNA scaffolds | 16 | 100.00 |
Total genes | 3,945 | 100.00 |
Protein coding genes | 3,836 | 97.24 |
RNA genes | 109 | 2.76 |
Pseudo genes | 0 | 0.00 |
Genes with internal clusters | 387 | 9.81 |
Genes with function prediction | 3,182 | 80.66 |
Genes assigned to COGs | 2,754 | 69.81 |
Genes with Pfam domains | 3,364 | 85.27 |
Genes with signal peptides | 191 | 4.84 |
Genes with transmembrane helices | 1,046 | 26.51 |
CRISPR repeats | 0 | 0.00 |