Skip to main content

Table 4 Number of genes associated with general COG functional categories

From: Permanent draft genome of Thermithiobacillus tepidarius DSM 3134T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia

Code

Value

% age

Description

J

190

6.9

Translation, ribosomal structure and biogenesis

A

1

0.0

RNA processing and modification

K

80

2.9

Transcription

L

88

3.2

Replication, recombination and repair

B

2

0.1

Chromatin structure and dynamics

D

40

1.5

Cell cycle control, Cell division, chromosome partitioning

V

67

2.4

Defense mechanisms

T

131

4.8

Signal transduction mechanisms

M

200

7.3

Cell wall/membrane biogenesis

N

92

3.3

Cell motility

U

58

2.1

Intracellular trafficking and secretion

O

124

4.5

Posttranslational modification, protein turnover, chaperones

C

166

6.0

Energy production and conversion

G

102

3.7

Carbohydrate transport and metabolism

E

145

5.3

Amino acid transport and metabolism

F

65

2.4

Nucleotide transport and metabolism

H

128

4.7

Coenzyme transport and metabolism

I

71

2.6

Lipid transport and metabolism

P

159

5.8

Inorganic ion transport and metabolism

Q

31

1.1

Secondary metabolites biosynthesis, transport and catabolism

R

162

5.9

General function prediction only

S

138

5.0

Function unknown

-

920

33.5

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome