Table 4 Number of genes associated with general COG functional categories
Code | 3Rp8 | 3Re4-18 | Description | ||
|---|---|---|---|---|---|
Value | %age | Value | %age | ||
J | 169 | 2.90 | 167 | 2.97 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | 1 | 0.02 | RNA processing and modification |
K | 441 | 7.57 | 445 | 7.92 | Transcription |
L | 170 | 2.92 | 152 | 2.70 | Replication, recombination and repair |
B | 1 | 0.02 | 1 | 0.02 | Chromatin structure and dynamics |
D | 27 | 0.46 | 28 | 0.50 | Cell cycle control, cell division, chromosome partitioning |
V | 58 | 1.00 | 56 | 1.00 | Defense mechanisms |
T | 141 | 2.42 | 146 | 2.60 | Signal transduction mechanisms |
M | 256 | 4.40 | 256 | 4.55 | Cell wall/membrane biogenesis |
N | 99 | 1.70 | 90 | 1.60 | Cell motility |
U | 54 | 0.93 | 49 | 0.87 | Intracellular trafficking and secretion |
O | 153 | 2.63 | 148 | 2.63 | Posttranslational modification, protein turnover, chaperones |
C | 261 | 4.48 | 259 | 4.61 | Energy production and conversion |
G | 412 | 7.08 | 406 | 7.22 | Carbohydrate transport and metabolism |
E | 442 | 7.59 | 433 | 7.70 | Amino acid transport and metabolism |
F | 89 | 1.53 | 90 | 1.60 | Nucleotide transport and metabolism |
H | 144 | 2.47 | 145 | 2.58 | Coenzyme transport and metabolism |
I | 150 | 2.58 | 138 | 2.45 | Lipid transport and metabolism |
P | 246 | 4.22 | 246 | 4.38 | Inorganic ion transport and metabolism |
Q | 96 | 1.65 | 91 | 1.62 | Secondary metabolites biosynthesis, transport and catabolism |
R | 383 | 6.58 | 385 | 6.85 | General function prediction only |
S | 284 | 4.88 | 285 | 5.07 | Function unknown |
- | 1746 | 29.98 | 1605 | 28.55 | Not in COGs |