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Table 1 Classification and general features of Serratia plymuthica 3Rp8 and 3Re4-18 according to the MIGS recommendations [20]

From: Complete genome sequences of the Serratia plymuthica strains 3Rp8 and 3Re4-18, two rhizosphere bacteria with antagonistic activity towards fungal phytopathogens and plant growth promoting abilities

MIGS ID

Property

Term

Evidence codea

 

Classification

Domain Bacteria

TAS [21]

  

Phylum Proteobacteria

TAS [22]

  

Class Gammaproteobacteria

TAS [23, 24]

  

Order “Enterobacteriales”

TAS [25]

  

Family Enterobacteriaceae

TAS [2628]

  

Genus Serratia

TAS [26, 29, 30]

  

Species Serratia plymuthica

TAS [26, 31]

  

Strain Serratia plymuthica 3Rp8

TAS [1]

  

Strain Serratia plymuthica 3Re4-18

TAS [3]

 

Gram stain

Gram-negative

TAS [30]

 

Cell shape

Rod-shaped

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-spore forming

IDA

 

Temperature range

5-40 °C

IDA

 

Optimum temperature

30 °C

IDA

 

pH range; Optimum

5–9; 6

IDA

 

Carbon source

Heterotrophic

IDA, TAS [1, 3, 4]

MIGS-6

Habitat

Root-associated

TAS [1, 3]

MIGS-6.3

Salinity

3Rp8 - 0.5 %-8 % NaCl (w/v)

3Re4-18 - 0.5 %-9 % NaCl (w/v)

IDA

MIGS-22

Oxygen requirement

Facultative anaerobe

TAS [30, 32]

MIGS-15

Biotic relationship

3Rp8 - Rhizospheric

3Re4-18 - Root endophytic

IDA, TAS [1]

IDA, TAS [3]

MIGS-14

Pathogenicity

Non-pathogenic

NAS, TAS [30, 33]

MIGS-4

Geographic location

3Rp8 - North Germany

3Re4-18 - West Germany

TAS [1]

TAS [3]

MIGS-5

Sample collection

3Rp8 - 1998

3Re4-18 - 2001

TAS [1]

TAS [3]

MIGS-4.1

Latitude

3Rp8 - ~52.27 N

3Re4-18 - ~50.72 N

NAS

MIGS-4.2

Longitude

3Rp8 - ~10.57 E

3Re4-18 - ~7.09 E

NAS

MIGS-4.4

Altitude

3Rp8 - ~72 m.a.s.l.

3Re4-18 - ~63 m.a.s.l.

NAS

  1. aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [34]