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Fig. 2 | Standards in Genomic Sciences

Fig. 2

From: Complete genome sequences of the Serratia plymuthica strains 3Rp8 and 3Re4-18, two rhizosphere bacteria with antagonistic activity towards fungal phytopathogens and plant growth promoting abilities

Fig. 2

Maximum likelihood 16S rDNA phylogenetic tree indicating the phylogenetic relationship of sequenced isolates. The phylogenetic relationships inferred from the alignment of 1532 bp of 16S rDNA highlighting the positions of S. plymuthica 3Rp8 and 3Re4-18 relative to their closest Serratia strains for which 16S rDNA sequences are publicly available. A representative rhizosphere bacterium from the genera Pseudomonas was used as outgroup. The evolutionary history was inferred by using the Maximum Likelihood method based on the Tamura-Nei model [35]. The percentage of trees in which the associated taxa clustered in the bootstrap test (1000 replicates) is shown next to the branches [36]. Evolutionary analyses were conducted in MEGA7 [37]

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