Table 4 Number of genes associated with general COG functional categories
Code | Value | % of total | Description |
|---|---|---|---|
J | 180 | 9.50 | Translation, ribosomal structure and biogenesis |
A | NA | Â | RNA processing and modification |
K | 72 | 3.80 | Transcription |
L | 84 | 4.43 | Replication, recombination and repair |
B | 2 | 0.11 | Chromatin structure and dynamics |
D | 26 | 1.37 | Cell cycle control, cell division, chromosome partitioning |
V | 44 | 2.32 | Defense mechanisms |
T | 134 | 7.07 | Signal transduction mechanisms |
M | 149 | 7.86 | Cell wall/membrane biogenesis |
N | 82 | 4.33 | Cell motility |
U | 50 | 2.64 | Intracellular trafficking and secretion |
O | 93 | 4.91 | Posttranslational modification, protein turnover, chaperones |
C | 139 | 7.34 | Energy production and conversion |
G | 67 | 3.54 | Carbohydrate transport and metabolism |
E | 129 | 6.81 | Amino acid transport and metabolism |
F | 53 | 2.80 | Nucleotide transport and metabolism |
H | 132 | 6.97 | Coenzyme transport and metabolism |
I | 52 | 2.74 | Lipid transport and metabolism |
P | 130 | 6.86 | Inorganic ion transport and metabolism |
Q | 20 | 1.06 | Secondary metabolites biosynthesis, transport and catabolism |
R | 134 | 7.07 | General function prediction only |
S | 70 | 3.69 | Function unknown |
- | 1031 | 37.74 | Not in COGs |