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Table 3 Genome statistics

From: Whole genome shotgun sequence of Bacillus amyloliquefaciens TF28, a biocontrol entophytic bacterium

Attribute Value % of Total
Genome size (bp) 3,987,635 100.00
DNA coding (bp) 3,571,596 89.57
DNA G + C (bp) 1,849,465 46.38
DNA scaffolds 3 -
Total genes 3863 100.00
Protein coding genes 3754 97.18
RNA genes 76 1.97
Pseudo genes 38 0.98
Genes in internal clusters 1554 40.23
Genes with function prediction 2941 76.13
Genes assigned to COGs 3218 83.30
Genes with Pfam domains 3292 85.21
Genes with signal peptides 204 5.28
Genes with transmembrane helices 1041 26.95
CRISPR repeats 3 -