Table 4 Number of genes associated with the general COG functional categories

J

282

7.09

Translation, ribosomal structure and biogenesis

A

1

0.03

RNA processing and modification

K

310

7.79

Transcription

L

138

3.47

Replication, recombination and repair

B

1

0.03

Chromatin structure and dynamics

D

49

1.23

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

101

2.54

Defense mechanisms

T

241

6.06

Signal transduction mechanisms

M

244

6.14

Cell wall/membrane biogenesis

N

144

3.62

Cell motility

Z

0

0

Cytoskeleton

W

38

0.96

Extracellular structures

U

93

2.34

Intracellular trafficking and secretion

O

185

4.65

Posttranslational modification, protein turnover, chaperones

X

65

1.63

Mobilome: prophages, transposons

C

208

5.23

Energy production and conversion

G

239

6.01

Carbohydrate transport and metabolism

E

326

8.2

Amino acid transport and metabolism

F

94

2.36

Nucleotide transport and metabolism

H

194

4.88

Coenzyme transport and metabolism

I

139

3.5

Lipid transport and metabolism

P

199

5

Inorganic ion transport and metabolism

Q

98

2.46

Secondary metabolites biosynthesis, transport and catabolism

R

332

8.35

General function prediction only

S

256

6.44

Function unknown

-

0

0

Not in COGs