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Table 4 Number of genes associated with the general COG functional categories

From: Genomic sequence analysis of a plant-associated Photobacterium halotolerans MELD1: from marine to terrestrial environment?

Code Value % agea Description
J 282 7.09 Translation, ribosomal structure and biogenesis
A 1 0.03 RNA processing and modification
K 310 7.79 Transcription
L 138 3.47 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 49 1.23 Cell cycle control, mitosis and meiosis
Y 0 0 Nuclear structure
V 101 2.54 Defense mechanisms
T 241 6.06 Signal transduction mechanisms
M 244 6.14 Cell wall/membrane biogenesis
N 144 3.62 Cell motility
Z 0 0 Cytoskeleton
W 38 0.96 Extracellular structures
U 93 2.34 Intracellular trafficking and secretion
O 185 4.65 Posttranslational modification, protein turnover, chaperones
X 65 1.63 Mobilome: prophages, transposons
C 208 5.23 Energy production and conversion
G 239 6.01 Carbohydrate transport and metabolism
E 326 8.2 Amino acid transport and metabolism
F 94 2.36 Nucleotide transport and metabolism
H 194 4.88 Coenzyme transport and metabolism
I 139 3.5 Lipid transport and metabolism
P 199 5 Inorganic ion transport and metabolism
Q 98 2.46 Secondary metabolites biosynthesis, transport and catabolism
R 332 8.35 General function prediction only
S 256 6.44 Function unknown
- 0 0 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the genome