Table 4 Number of genes associated with general COG functional categories
Code | Value | Percent of total | Description |
|---|---|---|---|
J | 206 | 5.6 | Translation, ribosomal structure and biogenesis |
A | - | - | RNA processing and modification |
K | 155 | 4.2 | Transcription |
L | 115 | 3.1 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 47 | 1.3 | Cell cycle control, cell division, chromosome partitioning |
V | 138 | 3.7 | Defense mechanisms |
T | 266 | 7.2 | Signal transduction mechanisms |
M | 292 | 7.9 | Cell wall/membrane biogenesis |
N | 57 | 1.5 | Cell motility |
W | 19 | 0.5 | Extracellular structures |
U | 41 | 1.1 | Intracellular trafficking and secretion |
O | 171 | 4.6 | Posttranslational modification, protein turnover, chaperones |
C | 201 | 5.5 | Energy production and conversion |
G | 195 | 5.3 | Carbohydrate transport and metabolism |
E | 239 | 6.5 | Amino acid transport metabolism |
F | 72 | 2.0 | Nucleotide transport and metabolism |
H | 235 | 6.4 | Coenzyme transport and metabolism |
I | 112 | 3.0 | Lipid transport and metabolism |
P | 247 | 6.7 | Inorganic ion transport and metabolism |
Q | 117 | 3.2 | Secondary metabolite biosynthesis, transport and catabolism |
R | 479 | 13.0 | General function prediction only |
X | 57 | 1.5 | Mobilome: prophages, transposons |
S | 227 | 6.2 | Function unknown |
- | 3062 | 47.8 | Not in COGs |