Skip to main content

Table 3 Genome statistics for Strain MRB 220

From: Insights from the draft genome of the subsection V (Stigonematales) cyanobacterium Hapalosiphon sp. Strain MRB220 associated with 2-MIB production

Attribute Value Percent of total
Genome size (bp) 7,429,720 100.0
DNA coding region (bp) 6,007,607 81.0
DNA G + C 2,985,683 40.2
DNA scaffolds 115 -
Total genes 6,404 100.0
Protein-coding genes 6,345 99.1
RNA genes 59 0.9
Pseudo genes 304 4.7
rRNA operonsa 4 0.1
Genes with function prediction 4,320 67.5
Genes assigned to COGs 3,342 52.2
Genes assigned pfam domains 4,652 72.6
Genes with signal peptides 201 3.1
Genes with transmembrane proteins 1,572 24.6
CRISPR repeats 7 -
  1. a1 copy of 5S, 1 copy of 16S and 2 copies of 23S rRNA (data obtained using the JGI IMG pipeline)