Table 4 Number of genes associated with the general COG functional categories
Code | Value | % of total (2895) | Description |
|---|---|---|---|
J | 194 | 6.70 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 106 | 3.66 | Transcription |
L | 94 | 3.25 | Replication, recombination and repair |
B | 2 | 0.07 | Chromatin structure and dynamics |
D | 27 | 0.93 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.00 | Nuclear Structure |
V | 96 | 3.32 | Defense mechanisms |
T | 230 | 7.94 | Signal transduction mechanisms |
M | 223 | 7.70 | Cell wall/membrane biogenesis |
N | 37 | 1.28 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 12 | 0.41 | Extracellular Structures |
U | 33 | 1.14 | Intracellular trafficking and secretion |
O | 145 | 5.01 | Posttranslational modification, protein turnover, chaperones |
C | 139 | 4.8 | Energy production and conversion |
G | 143 | 4.94 | Carbohydrate transport and metabolism |
E | 201 | 6.94 | Amino acid transport and metabolism |
F | 73 | 2.52 | Nucleotide transport and metabolism |
H | 187 | 6.46 | Coenzyme transport and metabolism |
I | 74 | 2.56 | Lipid transport and metabolism |
P | 167 | 5.77 | Inorganic ion transport and metabolism |
Q | 51 | 1.76 | Secondary metabolites biosynthesis, transport and catabolism |
R | 398 | 13.75 | General function prediction only |
S | 205 | 7.08 | Function unknown |
- | 2381 | 47.56 | Not in COGs |