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Table 4 Number of genes associated with general COG functional categories

From: High quality draft genome sequence of the type strain of Pseudomonas lutea OK2T, a phosphate-solubilizing rhizospheric bacterium

Code Value % age Description
J 231 5.75 Translation, ribosomal structure and biogenesis
A 1 0.02 RNA processing and modification
K 335 8.34 Transcription
L 121 3.01 Replication, recombination and repair
B 2 0.05 Chromatin structure and dynamics
D 34 0.85 Cell cycle control, Cell division, chromosome partitioning
V 73 1.82 Defense mechanisms
T 262 6.52 Signal transduction mechanisms
M 228 5.68 Cell wall/membrane biogenesis
N 133 3.31 Cell motility
U 97 2.41 Intracellular trafficking and secretion
O 152 3.78 Posttranslational modification, protein turnover, chaperones
C 248 6.17 Energy production and conversion
G 256 6.37 Carbohydrate transport and metabolism
E 416 10.36 Amino acid transport and metabolism
F 85 2.12 Nucleotide transport and metabolism
H 198 4.93 Coenzyme transport and metabolism
I 182 4.53 Lipid transport and metabolism
P 234 5.83 Inorganic ion transport and metabolism
Q 98 2.44 Secondary metabolites biosynthesis, transport and catabolism
R 350 8.71 General function prediction only
S 212 5.28 Function unknown
- 1434 29.02 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome