Table 4 Number of genes associated with the general COG functional categories
From: The complete genome sequence of the rumen methanogen Methanobrevibacter millerae SM9
Code | Value | % of totala | Description |
|---|---|---|---|
J | 145 | 6.39 | Translation |
A | 0 | 0.00 | RNA processing and modification |
K | 88 | 3.88 | Transcription |
L | 129 | 5.69 | Replication, recombination and repair |
B | 3 | 0.13 | Chromatin structure and dynamics |
D | 6 | 0.26 | Cell cycle control, mitosis and meiosis |
V | 37 | 1.63 | Defense mechanisms |
T | 15 | 0.66 | Signal transduction mechanisms |
M | 67 | 2.95 | Cell wall/membrane biogenesis |
N | 4 | 0.18 | Cell motility |
U | 9 | 0.40 | Intracellular trafficking and secretion |
O | 45 | 1.98 | Posttranslational modification, protein turnover, chaperones |
C | 162 | 7.14 | Energy production and conversion |
G | 48 | 2.12 | Carbohydrate transport and metabolism |
E | 114 | 5.02 | Amino acid transport and metabolism |
F | 46 | 2.03 | Nucleotide transport and metabolism |
H | 90 | 3.97 | Coenzyme transport and metabolism |
I | 28 | 1.23 | Lipid transport and metabolism |
P | 59 | 2.60 | Inorganic ion transport and metabolism |
Q | 25 | 1.10 | Secondary metabolites biosynthesis, transport and catabolism |
R | 205 | 9.03 | General function prediction only |
S | 145 | 6.39 | Function unknown |
- | 800 | 35.21 | Not in COGs |