Skip to main content

Advertisement

Table 4 Number of genes associated with the general COG functional categories

From: The complete genome sequence of the rumen methanogen Methanobrevibacter millerae SM9

Code Value % of totala Description
J 145 6.39 Translation
A 0 0.00 RNA processing and modification
K 88 3.88 Transcription
L 129 5.69 Replication, recombination and repair
B 3 0.13 Chromatin structure and dynamics
D 6 0.26 Cell cycle control, mitosis and meiosis
V 37 1.63 Defense mechanisms
T 15 0.66 Signal transduction mechanisms
M 67 2.95 Cell wall/membrane biogenesis
N 4 0.18 Cell motility
U 9 0.40 Intracellular trafficking and secretion
O 45 1.98 Posttranslational modification, protein turnover, chaperones
C 162 7.14 Energy production and conversion
G 48 2.12 Carbohydrate transport and metabolism
E 114 5.02 Amino acid transport and metabolism
F 46 2.03 Nucleotide transport and metabolism
H 90 3.97 Coenzyme transport and metabolism
I 28 1.23 Lipid transport and metabolism
P 59 2.60 Inorganic ion transport and metabolism
Q 25 1.10 Secondary metabolites biosynthesis, transport and catabolism
R 205 9.03 General function prediction only
S 145 6.39 Function unknown
- 800 35.21 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the genome