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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequences of three Xanthomonas translucens pathovar reference strains (pv. arrhenatheri, pv. poae and pv. phlei) with different specificities for forage grasses

Code

LMG 727

%

LMG 728

%

LMG 730

%

Description

J

173

4.46

173

4.49

171

4.56

Translation, ribosomal structure and biogenesis

A

2

0.00

2

0.00

3

0.00

RNA processing and modification

K

219

5.56

205

5.32

204

5.44

Transcription

L

136

3.5

136

3.53

135

3.60

Replication, recombination and repair

B

1

0.00

1

0.00

1

0.00

Chromatin structure and dynamics

D

33

0.85

32

0.83

33

0.88

Cell cycle control, Cell division, chromosome partitioning

V

71

1.83

62

1.6

70

1.86

Defense mechanisms

T

286

7.37

269

6.98

279

7.44

Signal transduction mechanisms

M

240

6.18

239

6.2

231

6.16

Cell wall/membrane biogenesis

N

124

3.19

126

3.27

122

3.25

Cell motility

U

123

3.17

116

3.01

123

3.28

Intracellular trafficking and secretion

O

0.00

0.00

0.00

0.00

0.00

0.00

Posttranslational modification, protein turnover, chaperones

C

195

5.02

195

5.06

191

5.09

Energy production and conversion

G

211

5.44

214

5.55

209

5.57

Carbohydrate transport and metabolism

E

248

6.39

244

6.33

249

6.64

Amino acid transport and metabolism

F

75

1.93

76

1.97

72

1.92

Nucleotide transport and metabolism

H

147

3.79

141

3.66

143

3.81

Coenzyme transport and metabolism

I

141

3.63

134

3.47

135

3.60

Lipid transport and metabolism

P

196

5.05

198

5.14

189

5.04

Inorganic ion transport and metabolism

Q

147

3.79

76

1.97

75

2.00

Secondary metabolites biosynthesis, transport and catabolism

R

369

9.51

364

9.45

356

9.49

General function prediction only

S

315

8.12

316

8.2

319

8.50

Function unknown

-

891

22.97

916

23.78

821

21.89

Not in COGs