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Table 3 Genome statistics

From: Draft genome sequences of three Xanthomonas translucens pathovar reference strains (pv. arrhenatheri, pv. poae and pv. phlei) with different specificities for forage grasses

Attribute LMG 727 % LMG 728 % LMG 730 %
Genome size (bp) 4,754,971 100.00 4,610,480 100.00 4,399,523 100.00
DNA coding (bp) 4,132,338 86.90 3,961,227 85.91 3,805,731 86.50
DNA G+C (bp) 3,250,022 68.35 3,149,419 68.31 3,007,954 68.37
DNA scaffolds 58 100.00 129 100.00 84 100.00
Total genes 3,933 100.00 3,906 100.00 3,803 100.00
Protein coding genes 3,878 98.6 3,851 98.6 3,749 98.6
RNA genes 55 1.40 55 1.40 54 1.40
Pseudo genes 0.00 0.00 0.00 0.00 0.00 0.00
Genes in internal clusters 978 24.86 924 23.65 876 23.03
Genes with function prediction 2,781 70.7 2,759 70.63 2,697 70.91
Genes assigned to COGs 2,987 75.94 2,935 75.14 2,928 76.99
Genes with Pfam domains 3,045 77.42 2,984 76.39 2,968 78.04
Genes with signal peptides 585 14.87 586 15 553 14.54
Genes with transmembrane helices 954 24.25 935 23.93 918 24.13
CRISPR repeats 0.00 0.00 0.00 0.00 0.00 0.00