|
Attribute
|
Genome (total)
|
|---|
| |
Value
|
% of totala
|
|---|
|
Genome size (bp)
|
3,488,867
|
100.00
|
|
DNA coding (bp)
|
3,117,033
|
89.34
|
|
DNA G + C (bp)
|
1,759,785
|
50.44
|
|
DNA scaffolds
|
133
|
100.00
|
|
Contigs
|
149
|
100.00
|
|
Total genesb
|
3,282
| |
|
RNA genes
|
80
| |
|
Pseudo genes
|
73
| |
|
Protein-coding genes
|
3,132
|
100.00
|
|
Genes in internal clusters
|
1,190
|
37.99
|
|
Genes with function prediction
|
2,388
|
76.25
|
|
Genes assigned to COGs
|
2,249
|
71.81
|
|
Genes with Pfam domains
|
2,710
|
86.53
|
|
Genes with signal peptides
|
367
|
11.72
|
|
Genes with transmembrane helices
|
1,101
|
35.15
|
|
CRISPR repeats
|
1
| |
-
aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
-
bAlso includes 73 pseudogenes, 73 tRNA genes, 5 rRNAs and 2 ncRNA
