Draft genomic sequence of a chromate- and sulfate-reducing Alishewanella strain with the ability to bioremediate Cr and Cd contamination

Table 3 Nucleotide content and gene count levels of the genome

Attribute	Genome (total)
	Value	% of total^a
Genome size (bp)	3,488,867	100.00
DNA coding (bp)	3,117,033	89.34
DNA G + C (bp)	1,759,785	50.44
DNA scaffolds	133	100.00
Contigs	149	100.00
Total genes^b	3,282
RNA genes	80
Pseudo genes	73
Protein-coding genes	3,132	100.00
Genes in internal clusters	1,190	37.99
Genes with function prediction	2,388	76.25
Genes assigned to COGs	2,249	71.81
Genes with Pfam domains	2,710	86.53
Genes with signal peptides	367	11.72
Genes with transmembrane helices	1,101	35.15
CRISPR repeats	1

^aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome
^bAlso includes 73 pseudogenes, 73 tRNA genes, 5 rRNAs and 2 ncRNA

ISSN: 2524-6372