Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 149 | 7.32 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.05 | RNA processing and modification |
K | 82 | 4.03 | Transcription |
L | 122 | 6.00 | Replication, recombination and repair |
B | 1 | 0.05 | Chromatin structure and dynamics |
D | 25 | 1.23 | Cell cycle control, Cell division, chromosome partitioning |
V | 24 | 1.18 | Defense mechanisms |
T | 75 | 3.69 | Signal transduction mechanisms |
M | 167 | 8.21 | Cell wall/membrane biogenesis |
N | 53 | 2.60 | Cell motility |
U | 67 | 3.29 | Intracellular trafficking and secretion |
O | 114 | 5.60 | Posttranslational modification, protein turnover, chaperones |
C | 153 | 7.52 | Energy production and conversion |
G | 88 | 4.32 | Carbohydrate transport and metabolism |
E | 140 | 6.88 | Amino acid transport and metabolism |
F | 54 | 2.65 | Nucleotide transport and metabolism |
H | 99 | 4.86 | Coenzyme transport and metabolism |
I | 73 | 3.59 | Lipid transport and metabolism |
P | 106 | 5.21 | Inorganic ion transport and metabolism |
Q | 57 | 2.80 | Secondary metabolites biosynthesis, transport and catabolism |
R | 202 | 9.93 | General function prediction only |
S | 183 | 8.99 | Function unknown |
- | 1224 | 39.83 | Not in COGs |