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Table 1 Classification and general features of Nitrosospira briensis C-128 [42, 43]

From: Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [44]

 

Phylum Proteobacteria

TAS [45]

 

Class Betaproteobacteria

TAS [7, 46]

 

Order Nitrosomonadales

TAS [5, 46]

 

Family Nitrosomonadaceae

TAS [4, 46]

 

Genus Nitrosospira

TAS [6, 8]

 

Species Nitrosospira briensis

TAS [6, 8]

 

Strain C-128

IDA

 

Gram stain

negative

TAS [14]

 

Cell shape

Spiral/vibrioid

IDA

 

Motility

motile

TAS [14]

 

Sporulation

Non-sporulating

TAS [14]

 

Temperature range

15–30 °C

TAS [14]

 

Optimum temperature

25–28 °C

TAS [14]

 

pH range; Optimum

6.0–8.2;7.0

TAS [14]

 

Carbon source

carbon dioxide; carbonate

TAS [14]

 

Energy source

ammonia oxidation

TAS [14]

 

Energy metabolism

chemolithotroph

TAS [14]

MIGS-6

Habitat

soil (acid)

IDA

MIGS-6.3

Salinity

Non-halophile

TAS [14]

MIGS-22

Oxygen requirement

Aerobic

TAS [14]

MIGS-23

Isolation and growth conditions

Isolation after enrichment on inorganic ammonium salts medium

TAS [14]

MIGS-15

Biotic relationship

Free living

NAS

MIGS-14

Pathogenicity

Non-pathogen

NAS

 

Biosafety level

1

NAS

MIGS-4

Geographic location

East Falmouth, MA, USA

NAS

MIGS-4.1

Latitude

41°35′38″ N

NAS

MIGS-4.2

Longitude

70°34′20″ W

NAS

MIGS-4.3

Depth

surface soil

NAS

MIGS-4.4

Altitude

6 m

NAS

MIGS-5

Sample collection

1971 Feb 18

NAS

  1. aEvidence codes – IDA Inferred from Direct Assay (first time in publication), TAS Traceable Author Statement (i.e. a direct report exists in the literature), NAS Non-traceable Author Statement (i.e. not directly observed for living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [47]