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Table 4 Number of genes associated with general COG functional categories

From: The complete genome sequence and analysis of vB_VorS-PVo5, a Vibrio phage infectious to the pathogenic bacterium Vibrio ordalii ATCC-33509

Code Value % of Totala Description
J   0 Translation, ribosomal structure and biogenesis
A   0 RNA processing and modification
K 1 1,08 Transcription
L 13 13,98 Replication, recombination and repair
B   0 Chromatin structure and dynamics
D   0 Cell cycle control, Cell division, chromosome partitioning
V   0 Defense mechanisms
T   0 Signal transduction mechanisms
M   0 Cell wall/membrane biogenesis
N   0 Cell motility
U   0 Intracellular trafficking and secretion
O   0 Posttranslational modification, protein turnover, chaperones
C   0 Energy production and conversion
G   0 Carbohydrate transport and metabolism
E   0 Amino acid transport and metabolism
F 1 1,08 Nucleotide transport and metabolism
H   0 Coenzyme transport and metabolism
I   0 Lipid transport and metabolism
P   0 Inorganic ion transport and metabolism
Q   0 Secondary metabolites biosynthesis, transport and catabolism
R   0 General function prediction only
S 59 63,44 Function unknown
- 1 1,08 Not in COGs
X 18 19,35 Mobilome: Prophage, Transposons
  1. aThe total is based on the total number of protein coding genes in the genome