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Table 6 Putative reductive dehalogenase membrane anchoring proteins (rdhB) of Dehalogenimonas alkenigignens IP3-3T

From: Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3T)

Locus tag ORF size (bp) mol% G + C Protein size (aa) TMa Cognate rdhA Closest homolog
Locus tag Identity Size (aa)
DEALK_00250 285 42.81 94 3 None b GY50_1377 45 % 91
DEALK_05730 270 58.52 89 3 None DGWBC_0212 85 % 89
DEALK_11280 294 59.52 97 3 DEALK_11290 Dehly_1504 56 % 88
DEALK_17210 228 37.28 75 2 DEALK_17200 Dehly_1525 96 % 72
DEALK_19040 279 49.46 92 3 DEALK_19050 Dehly_0276 70 % 91
  1. a Number of transmembrane helices as predicted by TMHMM2.0 [16]
  2. b A pseudogene (DEALK_00260) upstream of the putative rdhB gene is predicted to encode a 33 aa fragment with high sequence identity (63 %) with the C-terminus of a putative reductive dehalogenase of Dehalococcoides mccartyi 195T (DET0235)