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Fig. 1 | Standards in Genomic Sciences

Fig. 1

From: Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3T)

Fig. 1

Phylogenetic tree showing the position of D. alkenigignens IP3-3T (shown in bold) relative to the other species of the genus Dehalogenimonas and type species of other genera within the phylum Chloroflexi. The tree was inferred from 1392 aligned nucleotide positions of the 16S rRNA gene sequence using the Neighbor-Joining method within the MEGA v4.0.2 package [60]. Scale bar represents 2 substitutions per 100 nucleotide positions. Numbers at branching points denote support values from 1000 bootstrap replicates if larger than 70 %. Lineages with published genomes are: Anaerolinea thermophila UNI-1T (AP012029), Ardenticatena maritima 110ST (LGKN00000000), Bellilinea caldifistulae GOMI-1T (BBXX00000000), Caldilinea aerophila STL-6-O1T (AP012337), Chloroflexus aurantiacus J-10-flT (CP000909), Dehalococcoides mccartyi 195 T (CP000027), Dehalogenimonas alkenigignens IP3-3T (LFDV00000000), Dehalogenimonas lykanthroporepellens BL-DC-9T (CP002084), Herpetosiphon aurantiacus DSM 785T (CP000875), Kallotenue papyrolyticum JKG1T (JAGA00000000), Ktedonobacter racemifer SOSP1-21T (ADVG00000000), Leptolinea tardivitalis YMTK-2T (LGCK00000000), Levilinea saccharolytica KIBI-1 T (BBXZ00000000), Longilinea arvoryzae KOME-1T (BBXY00000000), Nitrolancea hollandica LbT (CAGS00000000), Ornatilinea apprima P3M-1T (LGCL00000000), Oscillochloris trichoides DG-6T (ADVR00000000), Roseiflexus castenholzii DSM 13941T (CP000804), Sphaerobacter thermophiles DSM 20745T (CP001823), “Thermanaerothrix daxensis” GNS-1 (LGKO00000000), “Thermobaculum terrenum” YNP1 (CP001825), Thermomicrobium roseum DSM 5159T (CP001275), and Thermorudis peleae KI4 T (JQMP00000000)

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