TY - JOUR AU - Bowman, K. S. AU - Nobre, M. F. AU - Costa, M. S. AU - Rainey, F. A. AU - Moe, W. M. PY - 2013 DA - 2013// TI - Dehalogenimonas alkenigignens sp. nov., a chlorinated alkane dehalogenating bacterium isolated from groundwater JO - Int J Syst Evol Microbiol VL - 63 UR - https://doi.org/10.1099/ijs.0.045054-0 DO - 10.1099/ijs.0.045054-0 ID - Bowman2013 ER - TY - JOUR AU - Chen, J. AU - Bowman, K. S. AU - Rainey, F. A. AU - Moe, W. M. PY - 2014 DA - 2014// TI - Reassessment of PCR primers targeting 16S rRNA genes of the organohalide-respiring genus Dehalogenimonas JO - Biodegradation VL - 25 UR - https://doi.org/10.1007/s10532-014-9696-z DO - 10.1007/s10532-014-9696-z ID - Chen2014 ER - TY - JOUR AU - Dillehay, J. L. AU - Bowman, K. S. AU - Yan, J. AU - Rainey, F. A. AU - Moe, W. M. PY - 2014 DA - 2014// TI - Substrate interactions in dehalogenation of 1,2-dichloroethane, 1,2-dichloropropane, and 1,1,2-trichloroethane mixtures by Dehalogenimonas spp JO - Biodegradation VL - 25 UR - https://doi.org/10.1007/s10532-013-9661-2 DO - 10.1007/s10532-013-9661-2 ID - Dillehay2014 ER - TY - JOUR AU - Maness, A. D. AU - Bowman, K. S. AU - Yan, J. AU - Rainey, F. A. AU - Moe, W. M. PY - 2012 DA - 2012// TI - Dehalogenimonas spp. can reductively dehalogenate high concentrations of 1,2-dichloroethane, 1,2-dichloropropane, and 1,1,2-trichloroethane JO - AMB Express VL - 2 UR - https://doi.org/10.1186/2191-0855-2-54 DO - 10.1186/2191-0855-2-54 ID - Maness2012 ER - TY - JOUR AU - Moe, W. M. AU - Yan, J. AU - Nobre, M. F. AU - Costa, M. S. AU - Rainey, F. A. PY - 2009 DA - 2009// TI - Dehalogenimonas lykanthroporepellens gen. nov., sp. nov., a reductive dehalogenating bacterium isolated from chlorinated solvent contaminated groundwater JO - Int J Syst Evol Microbiol VL - 59 UR - https://doi.org/10.1099/ijs.0.011502-0 DO - 10.1099/ijs.0.011502-0 ID - Moe2009 ER - TY - JOUR AU - Löffler, F. E. AU - Yan, J. AU - Ritalahti, K. M. AU - Adrian, L. AU - Edwards, E. A. AU - Konstantinidis, K. T. PY - 2013 DA - 2013// TI - Dehalococcoides mccartyi gen. nov., sp. nov., obligate organohalide-respiring anaerobic bacteria, relevant to halogen cycling and bioremediation, belong to a novel class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi JO - Int J Syst Evol Microbiol VL - 63 UR - https://doi.org/10.1099/ijs.0.034926-0 DO - 10.1099/ijs.0.034926-0 ID - Löffler2013 ER - TY - JOUR AU - Pagani, I. AU - Liolios, K. AU - Jansson, J. AU - Chen, I. M. AU - Smirnova, T. AU - Nosrat, B. PY - 2012 DA - 2012// TI - The Genomes OnLine Database (GOLD) v. 4: status of genomic and metagenomic projects and their associated metadata JO - Nucleic Acids Res VL - 40 UR - https://doi.org/10.1093/nar/gkr1100 DO - 10.1093/nar/gkr1100 ID - Pagani2012 ER - TY - JOUR AU - Bennett, S. PY - 2004 DA - 2004// TI - Solexa Ltd JO - Pharmacogenomics VL - 5 UR - https://doi.org/10.1517/14622416.5.4.433 DO - 10.1517/14622416.5.4.433 ID - Bennett2004 ER - TY - JOUR AU - Margulies, M. AU - Egholm, M. AU - Altman, W. E. AU - Attiya, S. AU - Bader, J. S. AU - Bemben, L. A. PY - 2005 DA - 2005// TI - Genome sequencing in microfabricated high-density picolitre reactors JO - Nature VL - 437 ID - Margulies2005 ER - TY - JOUR AU - Hyatt, D. AU - Chen, G. L. AU - Locascio, P. F. AU - Land, M. L. AU - Larimer, F. W. AU - Hauser, L. J. PY - 2010 DA - 2010// TI - Prodigal: prokaryotic gene recognition and translation initiation site identification JO - BMC Bioinf VL - 11 UR - https://doi.org/10.1186/1471-2105-11-119 DO - 10.1186/1471-2105-11-119 ID - Hyatt2010 ER - TY - JOUR AU - Huntemann, M. AU - Ivanova, N. N. AU - Mavromatis, K. AU - Tripp, H. J. AU - Paez-Espino, D. AU - Palaniappan, K. AU - Szeto, E. AU - Pillay, M. AU - Chen, I. M. -. A. AU - Pati, A. AU - Nielsen, T. AU - Markowitz, V. M. AU - Kyrpides, N. C. PY - 2015 DA - 2015// TI - The Standard Operating Procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) JO - Stand Genomic Sci VL - 10 UR - https://doi.org/10.1186/s40793-015-0077-y DO - 10.1186/s40793-015-0077-y ID - Huntemann2015 ER - TY - JOUR AU - Pati, A. AU - Ivanova, N. AU - Mikhailova, N. AU - Ovchinikova, G. AU - Hooper, S. D. AU - Lykidis, A. PY - 2010 DA - 2010// TI - GenePRIMP: a gene prediction improvement pipeline for microbial genomes JO - Nat Methods VL - 7 UR - https://doi.org/10.1038/nmeth.1457 DO - 10.1038/nmeth.1457 ID - Pati2010 ER - TY - JOUR AU - Lowe, T. M. AU - Eddy, S. R. PY - 1997 DA - 1997// TI - tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.5.0955 DO - 10.1093/nar/25.5.0955 ID - Lowe1997 ER - TY - JOUR AU - Lagesen, K. AU - Hallin, P. F. AU - Rødland, E. AU - Stærfeldt, H. H. AU - Rognes, T. AU - Ussery, D. W. PY - 2007 DA - 2007// TI - RNammer: consistent annotation of rRNA genes in genomic sequences JO - Nucleic Acids Res VL - 35 UR - https://doi.org/10.1093/nar/gkm160 DO - 10.1093/nar/gkm160 ID - Lagesen2007 ER - TY - JOUR AU - Griffiths-Jones, S. AU - Bateman, A. AU - Marshall, M. AU - Khanna, A. AU - Eddy, S. R. PY - 2003 DA - 2003// TI - Rfam: an RNA family database JO - Nucleic Acids Res VL - 31 UR - https://doi.org/10.1093/nar/gkg006 DO - 10.1093/nar/gkg006 ID - Griffiths-Jones2003 ER - TY - JOUR AU - Krogh, A. AU - Larsson, B. AU - Heijne, G. AU - Sonnhammer, E. L. PY - 2001 DA - 2001// TI - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes JO - J Molecular Biol VL - 305 UR - https://doi.org/10.1006/jmbi.2000.4315 DO - 10.1006/jmbi.2000.4315 ID - Krogh2001 ER - TY - JOUR AU - Laslett, D. AU - Canback, B. PY - 2004 DA - 2004// TI - ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences JO - Nucleic Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh152 DO - 10.1093/nar/gkh152 ID - Laslett2004 ER - TY - JOUR AU - Zhang, Y. AU - Gladyshev, V. N. PY - 2005 DA - 2005// TI - An algorithm for identification of bacterial selenocysteine insertion sequence elements and selenoprotein genes JO - Bioinformatics VL - 21 UR - https://doi.org/10.1093/bioinformatics/bti400 DO - 10.1093/bioinformatics/bti400 ID - Zhang2005 ER - TY - JOUR AU - Bendtsen, J. D. AU - Nielsen, H. AU - Heijne, G. AU - Brunak, S. PY - 2004 DA - 2004// TI - Improved prediction of signal peptides: SignalP 3.0 JO - J Molecular Biol VL - 340 UR - https://doi.org/10.1016/j.jmb.2004.05.028 DO - 10.1016/j.jmb.2004.05.028 ID - Bendtsen2004 ER - TY - JOUR AU - Markowitz, V. M. AU - Mavromatis, K. AU - Ivanova, N. N. AU - Chen, I. M. AU - Chu, K. AU - Kyrpides, N. C. PY - 2009 DA - 2009// TI - IMG ER: a system for microbial genome annotation expert review and curation JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp393 DO - 10.1093/bioinformatics/btp393 ID - Markowitz2009 ER - TY - JOUR AU - Siddaramappa, S. AU - Challacombe, J. F. AU - Delano, S. F. AU - Green, L. D. AU - Daligault, H. AU - Bruce, D. PY - 2012 DA - 2012// TI - Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9(T)) and comparison to “Dehalococcoides” strains JO - Stand Genomic Sci VL - 6 UR - https://doi.org/10.4056/sigs.2806097 DO - 10.4056/sigs.2806097 ID - Siddaramappa2012 ER - TY - JOUR AU - Kube, M. AU - Beck, A. AU - Zinder, S. H. AU - Kuhl, H. AU - Reinhardt, R. AU - Adrian, L. PY - 2005 DA - 2005// TI - Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1 JO - Nat Biotechnol VL - 23 UR - https://doi.org/10.1038/nbt1131 DO - 10.1038/nbt1131 ID - Kube2005 ER - TY - JOUR AU - Pöritz, M. AU - Goris, T. AU - Wubet, T. AU - Tarkka, M. T. AU - Buscot, F. AU - Nijenhuis, I. PY - 2013 DA - 2013// TI - Genome sequences of two dehalogenation specialists – Dehalococcoides mccartyi strains BTF08 and DCMB5 enriched from the highly polluted Bitterfeld region JO - FEMS Microbiol Lett VL - 343 UR - https://doi.org/10.1111/1574-6968.12160 DO - 10.1111/1574-6968.12160 ID - Pöritz2013 ER - TY - JOUR AU - Seshadri, R. AU - Adrian, L. AU - Fouts, D. E. AU - Eisen, J. A. AU - Phillippy, A. M. AU - Methe, B. A. PY - 2005 DA - 2005// TI - Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes JO - Science VL - 307 UR - https://doi.org/10.1126/science.1102226 DO - 10.1126/science.1102226 ID - Seshadri2005 ER - TY - JOUR AU - Ravinesan, D. A. AU - Gupta, R. S. PY - 2014 DA - 2014// TI - Molecular signatures for members of the genus Dehalococcoides and the class Dehalococcoidia JO - Int J Syst Evol Microbiol VL - 64 UR - https://doi.org/10.1099/ijs.0.057919-0 DO - 10.1099/ijs.0.057919-0 ID - Ravinesan2014 ER - TY - JOUR AU - Donovan, J. AU - Copeland, P. R. PY - 2009 DA - 2009// TI - Evolutionary history of selenocysteine incorporation from the perspective of SECIS binding proteins JO - BMC Evol Biol VL - 9 UR - https://doi.org/10.1186/1471-2148-9-229 DO - 10.1186/1471-2148-9-229 ID - Donovan2009 ER - TY - JOUR AU - Zavacki, A. M. AU - Mansell, J. B. AU - Chung, M. AU - Klimovitsky, B. AU - Harney, J. W. AU - Berry, M. J. PY - 2003 DA - 2003// TI - Coupled tRNA(Sec)-dependent assembly of the selenocysteine decoding apparatus JO - Mol Cell VL - 11 UR - https://doi.org/10.1016/S1097-2765(03)00064-9 DO - 10.1016/S1097-2765(03)00064-9 ID - Zavacki2003 ER - TY - JOUR AU - Santos, H. AU - Costa, M. S. PY - 2002 DA - 2002// TI - Compatible solutes in organisms that live in hot saline environments JO - Environ Microbiol VL - 4 UR - https://doi.org/10.1046/j.1462-2920.2002.00335.x DO - 10.1046/j.1462-2920.2002.00335.x ID - Santos2002 ER - TY - JOUR AU - Empadinhas, N. AU - Albuquerque, L. AU - Costa, J. AU - Zinder, S. H. AU - Santos, M. A. AU - Santos, H. PY - 2004 DA - 2004// TI - A gene from the mesophilic bacterium Dehalococcoides ethenogenes encodes a novel mannosylglycerate synthase JO - J Bacteriol VL - 186 UR - https://doi.org/10.1128/JB.186.13.4075-4084.2004 DO - 10.1128/JB.186.13.4075-4084.2004 ID - Empadinhas2004 ER - TY - JOUR AU - Adrian, L. AU - Rahnenfuhrer, J. AU - Gobom, J. AU - Holscher, T. PY - 2007 DA - 2007// TI - Identification of a chlorobenzene reductive dehalogenase in Dehalococcoides sp. strain CBDB1 JO - Appl Environ Microbiol VL - 73 UR - https://doi.org/10.1128/AEM.01649-07 DO - 10.1128/AEM.01649-07 ID - Adrian2007 ER - TY - JOUR AU - Fung, J. M. AU - Morris, R. M. AU - Adrian, L. AU - Zinder, S. H. PY - 2007 DA - 2007// TI - Expression of reductive dehalogenase genes in Dehalococcoides ethenogenes strain 195 growing on tetrachloroethene, trichloroethene, or 2,3-dichlorophenol JO - Appl Environ Microbiol VL - 73 UR - https://doi.org/10.1128/AEM.00215-07 DO - 10.1128/AEM.00215-07 ID - Fung2007 ER - TY - JOUR AU - Holscher, T. AU - Gorisch, H. AU - Adrian, L. PY - 2003 DA - 2003// TI - Reductive dehalogenation of chlorobenzene congeners in cell extracts of Dehalococcoides sp. strain CBDB1 JO - Appl Environ Microbiol VL - 69 UR - https://doi.org/10.1128/AEM.69.5.2999-3001.2003 DO - 10.1128/AEM.69.5.2999-3001.2003 ID - Holscher2003 ER - TY - JOUR AU - Hug, L. AU - Maphosa, F. AU - Leys, D. AU - Löffler, F. E. AU - Smidt, H. AU - Edwards, E. A. AU - Adrian, L. PY - 2013 DA - 2013// TI - Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases JO - Philos Trans R Soc Lond B Biol Sci VL - 368 UR - https://doi.org/10.1098/rstb.2012.0322 DO - 10.1098/rstb.2012.0322 ID - Hug2013 ER - TY - JOUR AU - Magnuson, J. K. AU - Romine, M. F. AU - Burris, D. R. AU - Kingsley, M. T. PY - 2000 DA - 2000// TI - Trichloroethene reductive dehalogenase from Dehalococcoides ethenogenes: sequence of tceA and substrate range characterization JO - Appl Environ Microbiol VL - 66 UR - https://doi.org/10.1128/AEM.66.12.5141-5147.2000 DO - 10.1128/AEM.66.12.5141-5147.2000 ID - Magnuson2000 ER - TY - JOUR AU - Müller, J. A. AU - Rosner, B. M. AU - Abendroth, G. AU - Meshulam-Simon, G. AU - McCarty, P. L. AU - Spormann, A. M. PY - 2004 DA - 2004// TI - Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distribution JO - Appl Environ Microbiol VL - 70 UR - https://doi.org/10.1128/AEM.70.8.4880-4888.2004 DO - 10.1128/AEM.70.8.4880-4888.2004 ID - Müller2004 ER - TY - JOUR AU - Maillard, J. AU - Schumacher, W. AU - Vazquez, F. AU - Regeard, C. AU - Hagen, W. R. AU - Holliger, C. PY - 2003 DA - 2003// TI - Characterization of the corrinoid iron-sulfur protein tetrachloroethene reductive dehalogenase of Dehalobacter restrictus JO - Appl Environ Microbiol VL - 69 UR - https://doi.org/10.1128/AEM.69.8.4628-4638.2003 DO - 10.1128/AEM.69.8.4628-4638.2003 ID - Maillard2003 ER - TY - JOUR AU - Neumann, A. AU - Wohlfarth, G. AU - Diekert, G. PY - 1998 DA - 1998// TI - Tetrachloroethene dehalogenase from Dehalospirillum multivorans: cloning, sequencing of the encoding genes, and expression of the pceA gene in Escherichia coli JO - J Bacteriol VL - 180 ID - Neumann1998 ER - TY - JOUR AU - Nijenhuis, I. AU - Zinder, S. H. PY - 2005 DA - 2005// TI - Characterization of hydrogenase and reductive dehalogenase activities of Dehalococcoides ethenogenes strain 195 JO - Appl Environ Microbiol VL - 71 UR - https://doi.org/10.1128/AEM.71.3.1664-1667.2005 DO - 10.1128/AEM.71.3.1664-1667.2005 ID - Nijenhuis2005 ER - TY - JOUR AU - Padilla-Crespo, E. AU - Yan, J. AU - Swift, C. AU - Wagner, D. D. AU - Chourey, K. AU - Hettich, R. L. PY - 2014 DA - 2014// TI - Identification and environmental distribution of dcpA, which encodes the reductive dehalogenase catalyzing the dichloroelimination of 1,2-dichloropropane to propene in organohalide-respiring Chloroflexi JO - Appl Environ Microbiol VL - 80 UR - https://doi.org/10.1128/AEM.02927-13 DO - 10.1128/AEM.02927-13 ID - Padilla-Crespo2014 ER - TY - JOUR AU - Suyama, A. AU - Yamashita, M. AU - Yoshino, S. AU - Furukawa, K. PY - 2002 DA - 2002// TI - Molecular characterization of the PceA reductive dehalogenase of Desulfitobacterium sp. strain Y51 JO - J Bacteriol VL - 184 UR - https://doi.org/10.1128/JB.184.13.3419-3425.2002 DO - 10.1128/JB.184.13.3419-3425.2002 ID - Suyama2002 ER - TY - JOUR AU - Thibodeau, J. AU - Gauthier, A. AU - Duguay, M. AU - Villemur, R. AU - Lepine, F. AU - Juteau, P. PY - 2004 DA - 2004// TI - Purification, cloning, and sequencing of a 3,5-dichlorophenol reductive dehalogenase from Desulfitobacterium frappieri PCP-1 JO - Appl Environ Microbiol VL - 70 UR - https://doi.org/10.1128/AEM.70.8.4532-4537.2004 DO - 10.1128/AEM.70.8.4532-4537.2004 ID - Thibodeau2004 ER - TY - JOUR AU - Stanley, N. R. AU - Palmer, T. AU - Berks, B. C. PY - 2000 DA - 2000// TI - The twin arginine consensus motif of Tat signal peptides is involved in Sec-independent protein targeting in Escherichia coli JO - J Biol Chem VL - 275 UR - https://doi.org/10.1074/jbc.275.16.11591 DO - 10.1074/jbc.275.16.11591 ID - Stanley2000 ER - TY - JOUR AU - Sargent, F. AU - Berks, B. C. AU - Palmer, T. PY - 2006 DA - 2006// TI - Pathfinders and trailblazers: a prokaryotic targeting system for transport of folded proteins JO - FEMS Microbiol Lett VL - 254 UR - https://doi.org/10.1111/j.1574-6968.2005.00049.x DO - 10.1111/j.1574-6968.2005.00049.x ID - Sargent2006 ER - TY - JOUR AU - Bruschi, M. AU - Guerlesquin, F. PY - 1988 DA - 1988// TI - Structure, function and evolution of bacterial ferredoxins JO - FEMS Microbiol Rev VL - 4 UR - https://doi.org/10.1111/j.1574-6968.1988.tb02741.x DO - 10.1111/j.1574-6968.1988.tb02741.x ID - Bruschi1988 ER - TY - JOUR AU - Holliger, C. AU - Hahn, D. AU - Harmsen, H. AU - Ludwig, W. AU - Schumacher, W. AU - Tindall, B. PY - 1998 DA - 1998// TI - Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration JO - Arch Microbiol VL - 169 UR - https://doi.org/10.1007/s002030050577 DO - 10.1007/s002030050577 ID - Holliger1998 ER - TY - JOUR AU - Kruse, T. AU - Maillard, J. AU - Goodwin, L. AU - Woyke, T. AU - Teshima, H. AU - Bruce, D. PY - 2013 DA - 2013// TI - Complete genome sequence of Dehalobacter restrictus PER-K23T JO - Stand Genomic Sci VL - 8 UR - https://doi.org/10.4056/sigs.3787426 DO - 10.4056/sigs.3787426 ID - Kruse2013 ER - TY - JOUR AU - McMurdie, P. J. AU - Behrens, S. F. AU - Müller, J. A. AU - Göke, J. AU - Ritalahti, K. M. AU - Wagner, R. PY - 2009 DA - 2009// TI - Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides JO - PLoS Genet VL - 5 UR - https://doi.org/10.1371/journal.pgen.1000714 DO - 10.1371/journal.pgen.1000714 ID - McMurdie2009 ER - TY - STD TI - Molenda O, Quaile AT, Edwards EA. Dehalogenimonas WBC-2 genome and identification of its trans-dichloroethene reductive dehalogenase, TdrA. Appl Environ Microbiol. In press. doi:10.1128/AEM.02017-15 pmid:26452554 ID - ref48 ER - TY - JOUR AU - McMurdie, P. J. AU - Hug, L. A. AU - Edwards, E. A. AU - Holmes, S. AU - Spormann, A. M. PY - 2011 DA - 2011// TI - Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in Dehalococcoides JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-287 DO - 10.1186/1471-2164-12-287 ID - McMurdie2011 ER - TY - JOUR AU - Krajmalnik-Brown, R. AU - Sung, Y. AU - Ritalahti, K. M. AU - Saunders, F. M. AU - Löffler, F. E. PY - 2007 DA - 2007// TI - Environmental distribution of the trichloroethene reductive dehalogenase gene (tceA) suggests lateral gene transfer among Dehalococcoides JO - FEMS Microbiol Ecol VL - 59 UR - https://doi.org/10.1111/j.1574-6941.2006.00243.x DO - 10.1111/j.1574-6941.2006.00243.x ID - Krajmalnik-Brown2007 ER - TY - JOUR AU - Mukherjee, K. AU - Bowman, K. S. AU - Rainey, F. A. AU - Siddaramappa, S. AU - Challacombe, J. F. AU - Moe, W. M. PY - 2014 DA - 2014// TI - Dehalogenimonas lykanthroporepellens BL-DC-9T simultaneously transcribes many rdhA genes during organohalide respiration with 1,2-DCA, 1,2-DCP, and 1,2,3-TCP as electron acceptors JO - FEMS Microbiol Lett VL - 354 UR - https://doi.org/10.1111/1574-6968.12434 DO - 10.1111/1574-6968.12434 ID - Mukherjee2014 ER - TY - JOUR AU - Scholz-Muramatsu, H. AU - Neumann, A. AU - Meßmer, M. AU - Moore, E. AU - Diekert, G. PY - 1995 DA - 1995// TI - Isolation and characterization of Dehalospirillum multivorans gen. nov., sp. nov., a tetrachloroethene-utilizing, strictly anaerobic bacterium JO - Arch Microbiol VL - 163 UR - https://doi.org/10.1007/BF00262203 DO - 10.1007/BF00262203 ID - Scholz-Muramatsu1995 ER - TY - JOUR AU - Luijten, M. L. G. C. PY - 2003 DA - 2003// TI - de Weert J, Smidt Hauke, Boschker HTS, de Vos WM, Schraa G, Stams AJM. Description of Sulfurospirillum halorespirans sp. nov., an anaerobic, tetrachloroethene-respiring bacterium, and transfer of Dehalospirillum multivorans to the genus Sulfurospirillum as Sulfurospirillum multivorans comb. nov JO - Int J Syst Evol Microbiol VL - 53 UR - https://doi.org/10.1099/ijs.0.02417-0 DO - 10.1099/ijs.0.02417-0 ID - Luijten2003 ER - TY - JOUR AU - Miller, E. AU - Wohlfarth, G. AU - Diekert, G. PY - 1996 DA - 1996// TI - Studies on tetrachloroethene respiration in Dehalospirillum multivorans JO - Arch Microbiol VL - 166 UR - https://doi.org/10.1007/BF01682983 DO - 10.1007/BF01682983 ID - Miller1996 ER - TY - JOUR AU - Field, D. AU - Garrity, G. AU - Gray, T. AU - Morrison, N. AU - Selengut, J. AU - Sterk, P. PY - 2008 DA - 2008// TI - The minimum information about a genome sequence (MIGS) specification JO - Nat Biotechnol VL - 26 UR - https://doi.org/10.1038/nbt1360 DO - 10.1038/nbt1360 ID - Field2008 ER - TY - JOUR AU - Woese, C. R. AU - Kandler, O. AU - Wheelis, M. L. PY - 1990 DA - 1990// TI - Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya JO - Proc Natl Acad Sci U S A VL - 87 UR - https://doi.org/10.1073/pnas.87.12.4576 DO - 10.1073/pnas.87.12.4576 ID - Woese1990 ER - TY - CHAP AU - Garrity, G. M. AU - Phylum, H. J. G. ED - Garrity, G. M. ED - Boone, D. R. ED - Castenholz, R. W. PY - 2001 DA - 2001// TI - Chloroflexi phy. nov BT - Bergey’s Manual of Systematic Bacteriology. Volume 1 PB - Springer CY - New York UR - https://doi.org/10.1007/978-0-387-21609-6_23 DO - 10.1007/978-0-387-21609-6_23 ID - Garrity2001 ER - TY - JOUR AU - Hugenholtz, P. AU - Stackebrandt, E. PY - 2004 DA - 2004// TI - Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description) JO - Int J Syst Evol Microbiol VL - 54 UR - https://doi.org/10.1099/ijs.0.03028-0 DO - 10.1099/ijs.0.03028-0 ID - Hugenholtz2004 ER - TY - JOUR AU - Ashburner, M. AU - Ball, C. A. AU - Blake, J. A. AU - Botstein, D. AU - Butler, H. AU - Cherry, J. M. PY - 2000 DA - 2000// TI - Gene ontology: tool for the unification of biology JO - Nat Genet VL - 25 UR - https://doi.org/10.1038/75556 DO - 10.1038/75556 ID - Ashburner2000 ER - TY - JOUR AU - Tamura, K. AU - Dudley, J. AU - Nei, M. AU - Kumar, S. PY - 2007 DA - 2007// TI - MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. JO - Mol Biol Evol VL - 24 UR - https://doi.org/10.1093/molbev/msm092 DO - 10.1093/molbev/msm092 ID - Tamura2007 ER -