Table 3 Genome statistics
| Â | DSM 19838T | DSM 23547T | ||
|---|---|---|---|---|
Attribute | Number | % of Total | Number | % of Total |
Genome size (bp) | 3,513,826 | 100.0 | 3,269,398 | 100.0 |
DNA coding (bp) | 3,220,860 | 91.7 | 3,025,367 | 92.5 |
DNA G + C (bp) | 1,296,572 | 36.9 | 1,292,347 | 39.5 |
DNA, scaffolds | 18 | 100.0 | 8 | 100.0 |
Total genes | 3,253 | 100.0 | 3,045 | 100.0 |
Protein coding genes | 3,199 | 98.3 | 2,984 | 98.0 |
RNA genes | 54 | 1.7 | 61 | 2.0 |
Pseudo genes | 21 | 0.7 | 27 | 0.9 |
Genes in internal clusters | 216 | 6.6 | 174 | 5.7 |
Genes with function prediction | 2,464 | 75.8 | 2,302 | 75.6 |
Genes assigned to COGs | 1,863 | 57.3 | 1,747 | 75.6 |
Genes with Pfam domains | 2,564 | 78.8 | 2,409 | 79.1 |
Genes with signal peptides | 334 | 10.3 | 347 | 11.4 |
Genes with transmembrane helices | 766 | 23.6 | 662 | 21.7 |
CRISPR repeats | 1 | 0.1 | 0 | 0.0 |