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Table 2 Genome sequencing project information

From: Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050T (DSM 19838T) and Gramella portivictoriae UST040801-001T (DSM 23547T), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005

MIGS ID

Property

Term

  

DSM 19838T

DSM 23547T

MIGS-31

Finishing quality

Level 2: Improved High-Quality Draft

Level 2: Improved High-Quality Draft

MIGS-28

Libraries used

Illumina Std shotgun library, 2 × 150bp

Illumina Std shotgun library, 2 × 150bp

MIGS-29

Sequencing platforms

Illumina HiSeq 2000

Illumina HiSeq 2000

MIGS-31.2

Fold coverage

123×

122×

MIGS-30

Assemblers

Velvet v. 1.1.04, ALLPATHS v. r41043

Velvet v. 1.1.04, ALLPATHS v. r41043

MIGS-32

Gene calling method

Prodigal, GenePRIMP, IMG-ER

Prodigal, GenePRIMP, IMG-ER

 

Locus Tag

G530_RS01

G529_RS01

 

NCBI project ID

16158

16157

 

Genbank ID

AUHG00000000

AUHF00000000

 

Genbank Date of Release

2015-08-15

2013-12-12

 

GOLD ID

Gp0013656

Gp0013657

 

BIOPROJECT

PRJNA185622

PRJNA185621

MIGS-13

Source Material Identifier

DSM 19838

DSM 23547

 

Project relevance

Tree of Life, GEBA-KMG

Tree of Life, GEBA-KMG