Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 1,932,455 | 100.0 |
DNA coding (bp) | 1,818,441 | 94.1 |
DNA G + C (bp) | 907,872 | 47.0 |
DNA scaffolds | 1 | |
Total genes | 1,734 | 100.0 |
Protein coding genes | 1,684 | 97.1 |
RNA genes | 50 | 2.9 |
Pseudo genes | 19 | 1.1 |
Genes in internal clusters | 543 | 31.3 |
Genes with function prediction | 1,361 | 78.5 |
Genes assigned to COGs | 1,459 | 84.1 |
Genes with Pfam domains | 1,502 | 86.6 |
Genes with signal peptides | 124 | 7.2 |
Genes with transmembrane helices | 357 | 20.6 |
CRISPR repeats | 0 |