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Table 2 Project information

From: Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477T)

MIGS ID

Property

Term

MIGS 31

Finishing quality

Finished

MIGS-28

Libraries used

One 454 pyrosequence standard library, one 454 PE library (9 kb insert size), one Illumina library

MIGS 29

Sequencing platforms

Illumina GAii, 454 GS FLX Titanium

MIGS 31.2

Fold coverage

1,521.2 × Illumina, 38.2 × pyrosequence

MIGS 30

Assemblers

Newbler version 2.3, Velvet version 0.7.63, phrap version SPS – 4.24

MIGS 32

Gene calling method

Prodigal

 

Locus Tag

Thicy

 

Genbank ID

CP002776

 

GenBank Date of Release

July 6, 2012

 

GOLD ID

Gc01777

 

BIOPROJECT

PRJNA52629

MIGS 13

Source Material Identifier

DSM 14477

 

Project relevance

Biotechnological, Bioremediation