Table 2 Project information
From: Draft genome sequence of Fusicladium effusum, cause of pecan scab
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | High quality draft |
MIGS-28 | Libraries used | 454: paired end sequences with 450b insert; Illumina: 1 kb paired-end library |
MIGS-29 | Sequencing platforms | Illumina Genome Analyzer IIx/454 GS-FLX Titanium |
MIGS-31.2 | Fold coverage | 170× |
MIGS-30 | Assemblers | ABySS V1.2.6/Newbler V2.3/Phrap/Paracel Transcript Assembler V3.0.0 |
MIGS-32 | Gene calling method | FGENESB/COG/KEGG (Also BLAST search (NCBI tblastx) against the NCBI NR (non-redundant) database and the genome sequences of Phaeosphaeria nodorum, Pyrenophora teres, and Saccharomyces cerevisiae) |
Locus tag | Locus Tags not reported | |
Genbank ID | GDCP00000000 | |
Genbank date of release | 2015-06-01 | |
GOLD ID | Not established in GOLD | |
BIOPROJECT | PRJNA285422 | |
MIGS-31 | Source material identifier | Not reported |
Project relevance | Biotechnology/mycology/disease control |