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Table 5 Pairwise comparison using the GGDC (Genome-to-Genome Distance Calculator) of F. suncheonense with a selection of currently available Flavobacterium genomes, F. enshiense (AVCS00000000), F. cauense (AVBI00000000), F. saliperosum (AVFO00000000) and F. columnare (CP003222), plus the type species F. aquatile (JRHH00000000)

From: High-quality draft genome sequence of Flavobacterium suncheonense GH29-5T (DSM 17707T) isolated from greenhouse soil in South Korea, and emended description of Flavobacterium suncheonense GH29-5T

F. suncheonenseversus % dDDH % C.I. dDDH HSP length/total length [%] Identities HSP/length [%] Identities/total length [%]
F. aquatile 18.7 2.6 4 76 3
F. cauense 21.2 3.0 45 79 36
F. columnare 20.9 2.6 4 79 3
F. enshiense 20.2 2.9 29 78 23
F. saliperosum 21.0 3.0 41 79 33
  1. Digital DDH values (dDDH) and the respective confidence intervals (C.I.) are specified for GGDC's recommended formula 2. The columns “HSP length / total length [%]”, “identities / HSP length [%]” and “identities / total length [%]” list similarities as calculated from the intergenomic distances, which were also reported by the GGDC (Formulae 1–3)
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Environmental Microbiome

ISSN: 2524-6372