Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,880,663 | 100.0 |
DNA coding (bp) | 2,622,751 | 91.1 |
DNA G + C (bp) | 1,165,575 | 40.5 |
DNA scaffolds | 54 | Â |
Total genes | 2821 | 100.0 |
Protein coding genes | 2739 | 97.1 |
RNA genes | 82 | 2.9 |
Pseudo genes | 0 | 0.0 |
Genes in internal clusters | 125 | 4.43 |
Genes with function prediction | 1916 | 67.92 |
Genes assigned to COGs | 1439 | 51.01 |
Genes with Pfam domains | 2020 | 71.61 |
Genes with signal peptides | 348 | 12.34 |
Genes with transmembrane helices | 631 | 22.37 |
CRISPR repeats | 0 | Â |