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Table 1 Classification and general features of Ensifer sp. PC2 in accordance with the MIGS recommendations [47] published by the Genome Standards Consortium [48]

From: High-quality permanent draft genome sequence of Ensifer sp. PC2, isolated from a nitrogen-fixing root nodule of the legume tree (Khejri) native to the Thar Desert of India

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [49]

  

Phylum Proteobacteria

TAS [50, 51]

  

Class Alphaproteobacteria

TAS [52, 53]

  

Order Rhizobiales

TAS [54]

  

Family Rhizobiaceae

TAS [55]

  

Genus Ensifer

TAS [56–58]

  

Species Ensifer sp.

IDA

  

Strain: PC2

TAS [21]

 

Gram stain

Negative

IDA

 

Cell shape

Rod

IDA

 

Motility

Motile

IDA

 

Sporulation

Non-sporulating

NAS

 

Temperature range

10-40 °C

IDA

 

Optimum temperature

28 °C

IDA

 

pH range; Optimum

5-9.5; 6.5-8

IDA

 

Carbon source

Mannitol, tryptone, yeast extract

TAS [21]

MIGS-6

Habitat

Soil; root nodule on host (Prosopis (L.) Druce)

TAS [21]

MIGS-6.3

Salinity

0.89-2.0 % (w/v)

NAS

MIGS-22

Oxygen requirement

Aerobic

TAS [21]

MIGS-15

Biotic relationship

Free living, symbiotic

TAS [21]

MIGS-14

Pathogenicity

Biosafety level 1

TAS [59]

MIGS-4

Geographic location

Jodhpur, Indian Thar Desert

TAS [21]

MIGS-5

Sample collection

October, 2009

TAS [21]

MIGS-4.1

Latitude

26.27061

TAS [21]

MIGS-4.2

Longitude

73.021177

TAS [21]

MIGS-4.3

Depth

0-10 cm

NAS

MIGS-4.4

Altitude

234 m

TAS [21]

  1. aEvidence codes – IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [60], [http://geneontology.org/page/guide-go-evidence-codes]