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Table 5 Number of genes associated with general COG functional categories

From: Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost

Code

Value

%age

Description

J

195

8.0

Translation, ribosomal structure and biogenesis

A

0

0.0

RNA processing and modification

K

143

5.8

Transcription

L

94

3.8

Replication, recombination and repair

B

1

0.1

Chromatin structure and dynamics

D

102

4.2

Cell cycle control, Cell division, chromosome partitioning

V

65

2.6

Defense mechanisms

T

104

4.2

Signal transduction mechanisms

M

102

4.2

Cell wall/membrane biogenesis

N

62

2.5

Cell motility

U

33

1.4

Intracellular trafficking and secretion

O

97

4.0

Posttranslational modification, protein turnover, chaperones

C

140

5.7

Energy production and conversion

G

128

5.2

Carbohydrate transport and metabolism

E

222

9.1

Amino acid transport and metabolism

F

71

2.9

Nucleotide transport and metabolism

H

158

6.5

Coenzyme transport and metabolism

I

99

4.0

Lipid transport and metabolism

P

131

5.3

Inorganic ion transport and metabolism

Q

45

1.8

Secondary metabolites biosynthesis, transport and catabolism

R

194

7.9

General function prediction only

S

157

6.4

Function unknown

-

1396

38.8

Not in COGs

  1. The total is based on the total number of protein coding genes in the genome